Methods in Molecular Biology

1. Identifying RNA Recombination Events and Non-covalent RNA-RNA Interactions with the Molecular Colony Technique Helena V. Chetverina and Alexander B. Chetverin 2. RNA-directed Recombination of RNA in Vitro Niles Lehman, Nilesh Vaidya, and Jessica A. M. Yeates 3. RNA-RNA Selex B. Cho 4. Identification of Antisense RNA S0tem-loops that Inhibit RNA-protein Interactions using a Bacterial Reporter System Kazuo Harada 5. Trans-activation of Large Ribozymes Matthew B. Martin, Thomas L. Leeper, and Frank J. Schmidt 6. Native Purification and Labeling of RNA for Single Molecule Fluorescence Studies Arlie J. Rinaldi, Krishna C. Suddala,and Nils G. Walter 7. Single Molecule Studies of RNA-RNA Interactions Dongmei Yu, Peiwu Qin, and Peter V. Cornish 8. Modification Interference Analysis of the Ribosome Simpson Joseph 9. Assessing Intermolecular RNA:RNA Interactions Within a Ribonucleoprotein Complex Using Heavy Metal Cleavage Mapping Keith T. Gagnon and E. Stuart Maxwell 10. Monitoring RNA-RNA Interactions With Electrophoretic Mobility Shift Assays: Analysis Of Trna Binding To The T Box Riboswitch Antiterminator RNA R. Anupam, S. Zhou, and J.V. Hines 11. Electrophoretic Mobility Shift Assay of RNA-RNA Complexes Geunu Bak, Kook Han, Kwang-sun Kim, and Younghoon Lee 12. Structural Studies of a Double-stranded RNA from Trypanosome RNA Editing by Small Angle X-ray Scattering Angela Criswell and Blaine H.M. Mooers 13. Fusion RNAs in Crystallographic Studies of Double-stranded RNA from Trypanosome RNA Editing Blaine H.M. Mooers