High Performance Scientific and Engineering Computing

Hardware/Software Support

By: Laurence Tianruo Yang (Editor), Yi Pan (Editor)

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Hardcover | 30 November 2003

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332 Pages

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23.5 x 15.88 x 1.91

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High Performance Scientific And Engineering Computing: Hardware/Software Support contains selected chapters on hardware/software support for high performance scientific and engineering computing from prestigious workshops in the fields such as PACT-SHPSEC, IPDPS-PDSECA and ICPP-HPSECA. This edited volume is basically divided into six main sections which include invited material from prominent researchers around the world. We believe all of these contributed chapters and topics not only provide novel ideas, new results and state-of-the-art techniques in this field, but also stimulate the future research activities in the area of high performance computing for science and engineering applications.
High Performance Scientific And Engineering Computing: Hardware/Software Support is designed for a professional audience, composed of researchers and practitioners in industry. This book is also suitable as a secondary text for graduate-level students in computer science and engineering.

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You Can Find This Book In

Non-Fiction Computing & I.T.Computer Science Computer Architecture & Logic Design Parallel Processing Science Science in General Scientific Equipment Systems Analysis & Design Computer Networking & Communications Computer Programming & Software Development Software Engineering

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Paperback

Published: 7th December 2010

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Preface	p. xi
Compilation and Architectural Support
Multithreaded Parallelism with OpenMP	p. 3
Introduction	p. 3
Background	p. 5
Performance Studies	p. 8
Conclusion and Further Work	p. 10
Source Listing	p. 12
Linear Data Distribution based on Index Analysis	p. 15
Introduction	p. 15
Overview of Data Distribution	p. 16
Motivation	p. 17
Linear Data Distribution	p. 18
Index Conversion and Iteration Space Conversion	p. 24
Experimental Results for Linear Distribution	p. 26
Summary	p. 28
Quantification of Memory Communication	p. 31
Introduction	p. 31
Related Work	p. 33
Motivating Example	p. 34
Experimental Details	p. 36
Quantifying Communication Cost	p. 37
Identifying Memory Communication Buffers	p. 39
Conclusions and Future Work	p. 42
The Need for Adaptive Dynamic Thread Scheduling	p. 45
Introduction	p. 46
Related Work	p. 47
Adaptive Dynamic Thread Scheduling with the Detector Thread	p. 48
Methodology	p. 52
Experimental Results	p. 55
Summary and Conclusion	p. 58
Numerical Computation
Performance Analysis of a BiCGSTAB Solver for Multiple-Marine-Propeller Simulation with Several MPI Libraries and Platforms	p. 63
Introduction	p. 63
Computational Configurations	p. 65
Using the MPI Libraries	p. 67
Results and Discussion	p. 71
Conclusions	p. 77
A New BLAS-3 Based Parallel Algorithm for Computing the Eigenvectors of Real Symmetric Matrices	p. 79
Introduction	p. 80
Review of the Conventional Inverse Iteration Method	p. 81
The Householder Inverse Iteration Method	p. 83
The Blocked Algorithm	p. 86
Numerical Results	p. 87
Conclusion	p. 91
Load Balancing
Load Balancing in SPMD Applications: Concepts and Experiments	p. 95
Introduction	p. 95
Classification of Load Balancing Algorithms	p. 96
Load Imbalancing Index	p. 99
Load Balancing in a Scientific SPMD Application	p. 99
Concluding Remarks	p. 106
Dynamic Load Balance Strategy: Application to Nonlinear Optics	p. 109
Introduction	p. 109
Nonlinear Maxwell-Lorentz Equations	p. 110
Numerical Approach	p. 112
Message Passing Approach	p. 115
Applications	p. 117
Conclusion	p. 124
Message-Passing Parallel Adaptive Quantum Trajectory Method	p. 127
Introduction	p. 128
The Hydrodynamic Formulation of Quantum Mechanics	p. 129
Simulation of Wavepacket Dynamics	p. 130
The Moving Weighted Least Squares Algorithm	p. 132
Loop Scheduling	p. 132
Experiments	p. 135
Concluding Remarks	p. 137
Performance Evaluation
Verifying Large-Scale System Performance during Installation using Modelling	p. 143
Introduction	p. 143
Performance Modelling	p. 144
The Alpha-Server ES45 Supercomputing System	p. 147
The Application and the Model	p. 148
Use of the SAGE Model to Validate System Performance	p. 148
Summary	p. 155
Mixed Level Modelling and Simulation of Large Scale HW/SW Systems	p. 157
Introduction	p. 157
Performance Estimation Techniques	p. 158
Our Modelling Approach	p. 160
Mixed Level System Simulation Environment	p. 162
Preliminary Results	p. 163
Conclusions and Future Work	p. 164
Grid Computing
Engineering an Autonomic Partitioning Framework for Grid-based SAMR Applications	p. 169
Introduction	p. 169
Problem Description	p. 171
ARMaDA: An Autonomic SAMR Partitioning Framework	p. 174
An Experimental Evaluation of Autonomic Partitioning Policies	p. 180
Summary and Conclusions	p. 185
A Resource Discovery Service For a Mobile Agents Based Grid Infrastructure	p. 189
Introduction	p. 189
The Grid And Web Services Models	p. 190
A Magda Overview	p. 192
The Discovery And Invocation Service	p. 194
Related Work	p. 197
xDGDL: Towards an XML-based DataGrid Description Language	p. 201
Introduction	p. 201
A Novel File Hierarchy	p. 202
xDGDL - the XML Data Grid Description Language	p. 205
A Practical xDGDL Example	p. 209
An Application of xDGDL	p. 211
Conclusions and Future Work	p. 212
Scientific and Engineering Applications
A Large-scale MD Simulation for Formation Process of Carbon Cluster on a Parallel Computer	p. 217
Introduction	p. 218
Basic information	p. 218
Parallelization Process	p. 225
Parallelization Results	p. 227
Approximation of Execution Times and Outstanding Problems	p. 229
Conclusion	p. 230
Comparing Various Parallelizing Approaches for Tribology Simulations	p. 231
Introduction	p. 231
Parallelization Approaches	p. 233
Molecular Dynamics	p. 238
Experiments and Analysis	p. 242
Conclusion and Future Work	p. 244
Sequential Code	p. 249
OpenMP Code	p. 251
MPI Code	p. 251
Strings DSM Code	p. 252
High Performance Air Pollution Simulation on Shared Memory Systems	p. 253
Introduction	p. 253
Air Pollution Modelling	p. 254
Sequential Profile of the STEM-II Program	p. 255
Optimization of the Sequential Code	p. 258
Parallel Code Using OpenMP	p. 261
An Ant Colony Optimization Based Routing Algorithm in Mobile Ad hoc Networks and its Parallel Implementation	p. 267
Introduction	p. 268
Background	p. 269
Parallel ACO Routing Algorithm	p. 273
Experimental Results	p. 277
Conclusions	p. 280
Parallelizing Serializable Transactions Based on Transaction Classification in Real-time Database Systems	p. 285
Introduction	p. 285
Nature of Delays	p. 286
The Proposed Model	p. 288
Definitions for Real-time Database System	p. 290
Ordering of Transactions in a Distributed System	p. 291
An Algorithm to Construct LAG	p. 292
Performance Evaluation	p. 294
Summary and Conclusions	p. 297
Adaptive Selection of Materialized Queries in a Mediator for the Integration of Distributed Information Resources	p. 299
Introduction	p. 299
Related Work	p. 301
Decayed Usage Patterns	p. 303
Implementation Plans	p. 305
Experiments and Analysis of Results	p. 310
Conclusion	p. 312
Index	p. 315
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High Performance Scientific and Engineering Computing

Hardware/Software Support

At a Glance

Hardcover

Shipping

How to return your order

Defective items

You Can Find This Book In

Other Editions and Formats

Paperback

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