| Self-assembly | |
| Staged Self-assembly: Nanomanufacture of Arbitrary Shapes with O(1) Glues | p. 1 |
| Activatable Tiles: Compact, Robust Programmable Assembly and Other Applications | p. 15 |
| Constant-Size Tileset for Solving an NP-Complete Problem in Nondeterministic Linear Time | p. 26 |
| Solutions to Computational Problems Through Gene Assembly | p. 36 |
| Biomolecular Machines and Automata | |
| Toward Minimum Size Self-Assembled Counters | p. 46 |
| A Realization of DNA Molecular Machine That Walks Autonomously by Using a Restriction Enzyme | p. 54 |
| Autonomous Programmable Nanorobotic Devices Using DNAzymes | p. 66 |
| Multi-fueled Approach to DNA Nano-Robotics | p. 79 |
| Experimental Validation of the Transcription-Based Diagnostic Automata with Quantitative Control by Programmed Molecules | p. 89 |
| DNA Memory with 16.8M Addresses | p. 99 |
| Codes for DNA Memories and Computing | |
| Combining Randomness and a High-Capacity DNA Memory | p. 109 |
| Design of Code Words for DNA Computers and Nanostructures with Consideration of Hybridization Kinetics | p. 119 |
| Dynamic Neighborhood Searches for Thermodynamically Designing DNA Sequence | p. 130 |
| Sequence Design Support System for 4 x 4 DNA Tiles | p. 140 |
| DNA Codes Based on Stem Similarities Between DNA Sequences | p. 146 |
| Novel Techniques for DNA Computing in vitro | |
| Heuristic Solution to a 10-City Asymmetric Traveling Salesman Problem Using Probabilistic DNA Computing | p. 152 |
| An Approach for Using Modified Nucleotides in Aqueous DNA Computing | p. 161 |
| Modeling Non-specific Binding in Gel-Based DNA Computers | p. 170 |
| Stepwise Assembly of DNA Tile on Surfaces | p. 182 |
| An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring | p. 191 |
| Novel Techniques for DNA Computing in silico | |
| Hardware Acceleration for Thermodynamic Constrained DNA Code Generation | p. 201 |
| Hardware and Software Architecture for Implementing Membrane Systems: A Case of Study to Transition P Systems | p. 211 |
| Towards a Robust Biocomputing Solution of Intractable Problems | p. 221 |
| Discrete Simulations of Biochemical Dynamics | p. 231 |
| DNA Splicing Systems: An Ordinary Differential Equations Model and Simulation | p. 236 |
| Models and Languages | |
| Asynchronous Spiking Neural P Systems: Decidability and Undecidability | p. 246 |
| On 5' [approaches] 3' Sensing Watson-Crick Finite Automata | p. 256 |
| Equivalence in Template-Guided Recombination | p. 263 |
| Watson-Crick Conjugate and Commutative Words | p. 273 |
| DNA Coding Using the Subword Closure Operation | p. 284 |
| Author Index | p. 291 |
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