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Protein Folds

A Distance Based Approach

Hardcover

Published: 20th October 1995
RRP $761.99
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Written by outstanding scientists in physics and molecular biology, this book addresses the most recent advances in the analysis of the protein folding processes and protein structure determination. Emphasis is also placed on modelling and presentation of experimental results of structural membrane bound proteins.
Many color plates help to illustrate structural aspects covered including:
Defining folds of protein domains
Structure determination from sequence
Distance geometry
Lattice theories
Membrane proteins
Protein-Ligand interaction
Topological considerations
Docking onto receptors
All analysis is presented with proven theory and experimentation.
Protein Folds: A Distance-Based Approach is an excellent text/reference for biotechnologists and biochemists as well as graduate students studying in the research sciences.

Introduction
Color Plates
Three Paradoxes of Protein Foldingp. 3
Protein-Ligand Complexes and Protein Biosynthesis
Conserved Water Molecules and Protein Folding in Fungal Peroxidasesp. 21
Interplay between Metal Coordination Geometry and Protein Structurep. 31
Elongation Factor Tu: A G-protein in Protein Biosynthesisp. 43
Electron Transfer of the Di-Heme Protein: Pseudomonas stutzeri cytochrome c[subscript 4]p. 56
Profile Methods for Protein Structure and Fold Determination
Sequence Matching in Homology Modelingp. 71
Screening Genome Sequences for Known Foldsp. 80
Protein Fold Determination Using a small Number of Distance Restraintsp. 85
How many protein fold classes are to be found?p. 98
Distance-Based Protein Structure Prediction and Evaluation
The Effect of a Distance-Cutoff on the Performance of The Distance Matrix Error when used as a Potential Function to drive Conformational Searchp. 105
Protein Structure Prediction: How Self-misleading can be avoidedp. 114
Sequence Space Analysis: Identification of Functionally or Structurally important Residues in Protein Sequence Familiesp. 124
Fitting 1-D Predictions into 3-D Structuresp. 132
Determination of Membrane Bound Protein Structure and Function
Modelling [alpha]-helical Integral Membrane Proteinsp. 155
Use of Small Organic Compounds and Metal-ions as structural and functional probes in 7TM receptorsp. 165
Using Sequence Information and Model Building to explore Subtype Specificity in GPCRsp. 174
Statistical Mechanics and Kinetics of Protein Folding Processes
Proposed Rules of the Protein Folding Gamep. 189
Protein Folding Studied by Monte Carlo Simulationsp. 202
Folding Kinetics of Protein Like Heteropolymersp. 218
Energy Landscape and Folding Mechanisms in Proteinsp. 233
Topological Aspects of Protein Folds
Resonator Driven Protein Folding: The Implication of Topology for Protein Structure and Foldingp. 243
Chirality in Protein Structurep. 253
Packing Within And Between Subunits Defined By Internal Cavitiesp. 265
Protein Modelling and Docking
Modelling and predicting [alpha]-helical transmembrane structuresp. 283
HIV GP120 Docking Interactions and Inhibitor Design Based on an Atomic Structure Derived by Molecular Modeling Using the DREIDING II Force Fieldp. 294
A Model of the 3D Structure of Obelin - the Photoprotein from Obelia longissimap. 308
Indexp. 316
Table of Contents provided by Blackwell. All Rights Reserved.

ISBN: 9780849340093
ISBN-10: 0849340098
Audience: Professional
Format: Hardcover
Language: English
Number Of Pages: 336
Published: 20th October 1995
Dimensions (cm): 25.4 x 17.8  x 2.5
Weight (kg): 0.853