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Automated Taxon Identification in Systematics

Theory, Approaches, and Applications

By: Norman MacLeod (Editor)

Hardcover

Published: 1st June 2007
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The automated identification of biological objects or groups has been a dream among taxonomists and systematists for centuries. However, progress in designing and implementing practical systems for fully automated taxon identification has been frustratingly slow. Regardless, the dream has never died. Recent developments in computer architectures and innovations in software design have placed the tools needed to realize this vision in the hands of the systematics community, not several years hence, but now. And not just for DNA barcodes or other molecular data, but for digital images of organisms, digital sounds, digitized chemical data - essentially any type of digital data.
Based on evidence accumulated over the last decade and written by applied researchers, Automated Taxon Identification in Systematics explores contemporary applications of quantitative approaches to the problem of taxon recognition. The book begins by reviewing the current state of systematics and placing automated taxon identification in the context of contemporary trends, needs, and opportunities. The chapters present and evaluate different aspects of current automated system designs. They then provide descriptions of case studies in which different theoretical and practical aspects of the overall group-identification problem are identified, analyzed, and discussed.
A recurring theme through the chapters is the relationship between taxonomic identification, automated group identification, and morphometrics. This collection provides a bridge between these communities and between them and the wider world of applied taxonomy. The only book-length treatment that explores automated group identification in systematic context, this text also includes introductions to basic aspects of the fields of contemporary artificial intelligence and mathematical group recognition for the entire biological community.

Introductionp. 1
Digital Innovation and Taxonomy's Finest Hourp. 9
Natural Object Categorization: Man versus Machinep. 25
Neural Networks in Briefp. 47
Morphometrics and Computed Homology: An Old Theme Revisitedp. 69
The Automated Identification of Taxa: Concepts and Applicationsp. 83
DAISY: A Practical Computer-Based Tool for Semi-Automated Species Identificationp. 101
Automated Extraction and Analysis of Morphological Features for Species Identificationp. 115
Introducing SPIDA-Web: Wavelets, Neural Networks and Internet Accessibility in an Image-Based Automated Identification Systemp. 131
Automated Tools for the Identification of Taxa from Morphological Data: Face Recognition in Waspsp. 153
Pattern Recognition for Ecological Science and Environmental Monitoring: An Initial Reportp. 189
Plant Identification from Characters and Measurements Using Artificial Neural Networksp. 207
Spot the Penguin: Can Reliable Taxonomic Identifications Be Made Using Isolated Foot Bones?p. 225
A New Semi-Automatic Morphometric Protocol for Conodonts and a Preliminary Taxonomic Applicationp. 239
Decision Trees: A Machine-Learning Method for Characterizing Morphological Patterns Resulting from Ecological Adaptationp. 261
Data Integration and Multifactorial Analyses: The Yeasts and the BioloMICS Software as a Case Studyp. 277
Automatic Measurement of Honeybee Wingsp. 289
Good Performers Know Their Audience! Identification and Characterization of Pitch Contours in Infant- and Foreigner-Directed Speechp. 299
Appendixp. 311
Subject Indexp. 329
Taxon Indexp. 337
Table of Contents provided by Ingram. All Rights Reserved.

ISBN: 9780849382055
ISBN-10: 084938205X
Series: Systematics Association Special Volumes
Audience: Tertiary; University or College
Format: Hardcover
Language: English
Number Of Pages: 368
Published: 1st June 2007
Dimensions (cm): 25.4 x 17.8  x 2.2
Weight (kg): 0.794